PubMed Central: Visualizing a Historical Treasure Trove

By Tyler Nix, Kathryn Funk, Jeffrey S. Reznick, and Erin Zellers

“A wealth of medical history awaits your exploration in the National Library of Medicine’s (NLM) free and full-text digital archive of journals PubMed Central (PMC)! Known to most of its users as a free, full-text archive of recent biomedical journals, PMC also reaches back in time over two centuries.

An account of centralized health and relief agencies in Massachusetts during the 1918 influenza pandemic; an article by Florence Nightingale on nursing reform; a paper by W. H. R. Rivers on his treatment of “war neuroses” during World War I; a medical case report on America’s 20th president James A. Garfield, following his assassination in 1881; post-World War II thoughts about the future of the Army Medical Library by its director Frank Rogers; and seminal historical research articles aplenty: by Sir Alexander Fleming, on the use of penicillin to fight bacterial infections; by Walter Reed, on the transmission of yellow fever by mosquitoes; and by the bacteriologist Ida A. Bengtson, the first woman to work in the Hygienic Laboratory of the U.S. Public Health Service, the forerunner of the National Institutes of Health.”

Photos, and the article continues here:

http://circulatingnow.nlm.nih.gov/2016/02/23/pubmed-central-visualizing-a-historical-treasure-trove/  from 1809+

From NLM Office Of Communications <NLM_OfficeOfCommunications@public.govdelivery.com> 2/23/16

MEDLINE ANNUAL CHANGES/UPDATES

National Library of Medicine Technical Bulletin

This article collects the notable data changes made to MEDLINE during annual National Library of Medicine (NLM) maintenance known as Year-End Processing (YEP) for 2016:

MEDLINE Data Changes — 2016

Tybaert S. NLM Tech Bull. 2015 Nov-Dec;(407):e8.

2015 December 08 [posted]

Brand new concepts include: Autism Spectrum Disorder, Human Embryonic Stem Cells, Olive Oil, Origin of Life, Open Access Publishing, War-Related Injuries, RNAi Therapeutics, and many more terms.  Medline thesaurus terms are remapped when changes occur, so as to include articles under former headings.

Medical Subject Headings for 2016 are now available online

NLM [National Library of Medicine] New files for Nov 10, 2015

*NLM Technical Bulletin, Nov-Dec 2015, 2016 Medical Subject Headings Available for Download  http://www.nlm.nih.gov/pubs/techbull/nd15/nd15_2016_mesh_avail.html

NLM Technical Bulletin, Sep-Oct 2015, 2016 MeSH Headings Available in the MeSH Browser [Editor’s note added November 10, 2015]  http://www.nlm.nih.gov/pubs/techbull/so15/so15_2016_mesh_browser.html

Directory of Open Access Journals — DOAJ

This directory of OA journals is hosted by Lund University Libraries in Sweden.  From their homepage: http://www.doaj.org:

“DOAJ is an online directory that indexes and provides access to high quality, open access, peer-reviewed journals.”   One can search by keywords or browse through broader and narrower subject headings.

These stats are from their website, accessed Sept. 28, 2015:

Seen in “Outstanding Websites of 2014”, Choice, Sept. 2015, p. 33

mSphere — New OA journal, American Society for Microbiology

American Society for Microbiology announces 2016 launch of new OA journal – mSphere – 10 Jun 2015

The American Society for Microbiology (ASM) has announced plans to launch mSphereTM, a new pan-microbiology open-access journal, in early 2016. mSphere will create new opportunities for researchers in microbial sciences to share findings that are transforming our understanding of human health and disease, ecosystems, neuroscience, agriculture, energy production, climate change, evolution, biogeochemical cycling, and food and drug production.

mSphere will build on the success of mBio®, ASM’s first open access journal. Its scope will reflect the immense range of fields within the microbial sciences. An emphasis will be placed on bringing together these diverse fields to feature their common threads through the data, methods, and conceptual frameworks of original peer-reviewed research.

Dr. Michael Imperiale, Founding Editor in Chief of mSphere is the Arthur F. Thurnau Professor and Associate Chair of the Department of Microbiology and Immunology at the University of Michigan Medical School and a member of the University of Michigan Comprehensive Cancer Center.

Author of more than 135 peer-reviewed journal articles and book chapters, Dr. Imperiale has served as an editor of ASM’s Journal of Virology® and mBio® and associate editor of Virology and PLoS Pathogens.

ASM journals have long been recognized as important venues for dissemination of significant, high-quality microbiological research. The launch of mSphere will complement the excellence of ASM’s 10 specialised primary research journals. mSphere™ will welcome submissions from authors around the world and will provide rapid decisions on publication, while carrying on ASM’s tradition for rigorous peer review. Like the rest of the ASM journals program, the new journals will be hosted on the HighWire platform at journals.asm.org.

A formal ‘Call for Papers’ will be issued in September 2015, and the journal launch is planned for early 2016.”

Click here

Source:  Knowledgespeak News, June 10, 2015

Virus Evolution — New OA journal from OUP

The Virus Evolution      http://ve.oxfordjournals.org/

“Virus Evolution is a new Open Access journal focusing on the long-term evolution of viruses, viruses as a model system for studying evolutionary processes, viral molecular epidemiology and environmental virology.

The aim of the journal is to provide a forum for original research papers, reviews, commentaries and a venue for in-depth discussion on the topics relevant to virus evolution.”

“Editors-in Chief, Professor Oliver Pybus, University of Oxford, and Professor Santiago Elena, Instituto de Biología Molecular y Celular de Plantas (CSIC-UPV) welcome submissions at:https://mc.manuscriptcentral.com/vevolu.
Source of information:  Knowledgespeak Newsletter, Feb. 9, 2015

Table of Contents Alerts to > 25,000 Scholarly Journals

  • http://www.journaltocs.hw.ac.uk/

    “Current Awareness Services have been published by libraries for a long time. They usually include new books, table of contents alerts, blogs, citation alerts, and other information. JournalTOCs builds on the idea by offering tables of contents (TOCs) for the newest issues of thousands of academic journals via this free website. Readers may type in the name of any journal in the search function on the homepage to access that journal’s latest table of contents. They may also browse by publishers and subjects. For librarians, students, and scholars who want to keep up to date on the breaking research in their field, this is a valuable resource. [CNH]

  • Main Publishers
  • Source:  The Scout Report, Vol. 21(4), University of Wisconsin, Jan. 30, 2015

eLIFE — a respected OA journal

eLIFE

  • http://elifesciences.org“This highly thought of open access journal promises a speed and ease of publishing unheard of in most traditional life science journals. Initial decisions on a manuscript are usually made within days. Post-review decisions are made within weeks. Most articles only go through a single round of revisions. For the reader, this means that the results you’re reading are hot off the lab bench. Best of all, unlike most scientific journals, which can cost upwards of $20 for a single article, the 842 (and counting) articles on this site are completely free. The eLIFE podcast is also available for easy download, online listening, or subscription. [CNH]
  • Source:  The Scout Report — Volume 20, Number 40 (HTML)  Univ. of Wisconsin, 10/17/2014

bioRxiv (beta) Biology Preprint Server

bioRxiv beta The Preprint Server for Biology graphic

A not-for-profit bioscience information service,
from Cold Spring Harbor Laboratory

Watch the video here

  • Submit a paper and within 24 hours anyone can read and cite it, without waiting months until it’s reviewed
  • Free for authors, free for readers
  • Share your paper with other scientists without having to wait months before it’s reviewed
  • Get feedback on your paper before submitting it to a journal
    (more and more journals accept submissions that have appeared onbioRxiv)

bioRxiv contains hundreds of papers that present new, confirmatory, or contradictory findings

Biochemistry
Bioengineering
Bioinformatics
Biophysics
Cancer Biology
Cell Biology
Developmental Biology
Ecology
Evolutionary Biology
Genetics
Genomics
Immunology
Microbiology
Molecular Biology
Molecular Medicine
Neuroscience
Paleontology
Pathology
Pharmacology
Physiology
Plant Biology
Scientific
Communication
Synthetic Biology
Systems Biology
Zoology

More details, including submission instructions, at
bioRxiv.org

Cold Spring Harbor Laboratory graphic

Frontiers in Earth Science & Frontiers in Environmental Science

Switzerland Frontiers launches new open-access journals – Frontiers in Earth Science and Frontiers in Environmental Science – 06 Nov 2013

“Open-access publisher Frontiers, part of the Nature Publishing Group family, has announced the launch of two new open-access journals – Frontiers in Earth Science and Frontiers in Environmental Science.

Manuscripts submitted to specialty sections in “Frontiers in” journals are peer reviewed by specialty associate and review editors. Specialty Chief Editors oversee subject areas across the ‘Frontiers in’ journals.

The initial specialty sections open for submissions to Frontiers in Earth Science are: Atmospheric Science, Geomagnetism and Paleomagnetism, Hydrosphere, Interdisciplinary Climate Studies, Paleontology, Structural Geology and Tectonics, Quaternary Science, Geomorphology and Paleoenvironment and Structural Geology and Tectonics. Further specialty sections will be added soon.

Initially, Frontiers in Environmental Science will offer specialty sections in: Agroecology and Land Use Systems, Air Pollution, Atmospheric Science, Environmental Informatics, Environmental Toxicology, Green and Environmental Chemistry, Groundwater Resources and Management, Interdisciplinary Climate Studies, Microbiotechnology, Ecotoxicology and Bioremediation, Soil Processes, and Wastewater Management.

Frontiers publishes all articles under a Creative Commons Attribution license (CC-BY), which allows users to share, copy and distribute a work, while at the same time crediting the authors of the article.”

Click hereSource:  Knowledgespeak Newsletter