Category Archives: Research

BenchSci, an antibody-finding search engine free to academics

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The Peter B. Lewis Library is pleased to present BenchSci to the Princeton research community.

Registration is free to all scientists with a princeton.edu or affiliated institutional emails at https://www.benchsci.com

BenchSci is a online platform designed to help scientists find antibodies from publications. Their proprietary machine-learning algorithm was trained by PhD-level scientists to identify and understand the usage of commercial antibodies in the research literature.

When searching for a specific protein target, BenchSci curates published data in the form of figures to simplify the literature search process. The figures can then be filtered by specific experimental contexts cited in the paper such as techniques, tissue, cell lines, and more, to help users pinpoint antibodies that have been published under experimental conditions matching their study interest.

For more information about BenchSci, please refer to this article: https://blog.benchsci.com/7-features-to-find-antibodies

To learn how to navigate BenchSci, please watch this short video: https://youtu.be/EFaDwTtqlv4

For further inquiries or feedback, contact Maurice Shen, PhD, the Head of Academic Relations at BenchSci, at maurice@benchsci.com

How to Write a Good Scientific Paper by Chris A. Mack…free download

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SPIE Press has published a book that should be valuable to all students and faculty in science and engineering: How to Write a Good Scientific Paper by Chris A. Mack.

We are pleased to announce that it is available, for personal use only, at no charge as a PDF eBook, with the link at the book’s web page.

Alternatively anyone can order How to Write a Good Scientific Paper from SPIE’s Bookstore as a softcover book.

Princeton University Library has a link to the online version here:

https://catalog.princeton.edu/catalog/10712422

From the description:  “This book is all about teaching the style and conventions of writing for a peer-reviewed scientific journal. From structure to style, titles to tables, abstracts to author lists, this book gives practical advice about the process of writing a paper and getting it published”.

Contents:Preface — Chapter 1. Getting started — Chapter 2. Structure and organization — Chapter 3. Language and style — Chapter 4. Figures and tables — Chapter 5. Citations — Chapter 6. Abstract and title — Chapter 7. What an editor looks for — Chapter 8. Picking the right journal — Chapter 9. Cover letter — Chapter 10. The editorial review process — Chapter 11. Review articles — Chapter 12. The ethics of scientific publication — Chapter 13. Authorship — Chapter 14. Plagiarism — Chapter 15. Double publication — Chapter 16. Editorial ethics — Appendix: A checklist for editors, reviewers, and authors.

 

Data Management Plan Presentation – Wed., March 28th

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Data Management Plan Presentation

Wednesday, March 28, 12:00 – 1:00 pm

347 Lewis Science Library, Washington Road & Ivy Lane
[Lunch will be provided. RSVP here.]

This one-hour presentation by PU librarians, OIT and PICSciE/Research Computing staff is open to Princeton researchers, graduate students and grants personnel. Please share with those who may benefit from this presentation.

Topics

  • Why manage research data?
  • Elements of data management
  • How to write a data management plan
  • Common data management issues
  • Best practices for managing research data
  • Resources and support on campus

Springer Nature Experiments Database — an indexed searching tool

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German “Springer Nature launches Springer Nature Experiments – a free-to-use research solution for the life sciences – 12 Oct 2017

Springer Nature has launched a new, free-to-use research solution, Springer Nature Experiments, to help researchers in the life sciences advance discovery by accessing the most relevant protocols and methods to support their research projects.

Protocols are ‘recipes’ used in laboratory research to support the design and implementation of reproducible experiments. The step-by-step instructions help researchers recreate an experiment by typically including information on the materials required, equipment and set-up. Methods are new scientific procedures for solving existing problems. Together, these two different types of content are the cornerstone for scientists to successfully conduct their research.

Springer Nature publishes the largest available collection of protocols and methods for the life sciences with content from SpringerProtocols, Nature Methods, Nature Protocols and Protocol Exchange – the free repository for scientists to share their protocols with the scientific community. Springer Nature Experiments provides access to all of these through a single easy-to-use platform, designed to save researchers’ time.

The platform uses advanced knowledge models to categorise content based on techniques and organisms – the two most commonly used search categories identified in user research. With the help of cutting-edge artificial intelligence and text mining technologies, these terms are recognised and extracted from the content, enabling users to perform searches and narrow down their results quickly and easily.

In addition, users can evaluate and compare protocols prior to accessing the full-text with the help of protocol landing pages. These summarize key information such as the keywords mentioned, article history and citations which gives an indication of whether the protocol has been used successfully in other research projects.

Springer Nature Experiments is accessible online at https://experiments.springernature.com. Springer Nature will officially launch the new research solution at the Frankfurt Book Fair 2017.”

Source:  Knowledgespeak Newsletter

UK Medical Heritage Library

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UK” The UK Medical Heritage Library now available online for free – 10 May 2017

A £1m project to digitise more than 15 million pages of 19th century medical texts has been completed and the material is now available online for free. It has taken three years to convert these historic published works for use in the 21st century by learners, teachers and researchers.

Covering much more than just medical sciences, this enormous library of text and images encompasses consumer health, sport and fitness, diet and nutrition, along with some weird and wonderful historical medical practices such as phrenology and hydrotherapy.

The project was jointly funded by education technology solutions not-for-profit, Jisc, and Wellcome Library, which contributed its entire 19th century collection, along with content from nine partner institutions: Royal College of Physicians of London, Royal College of Physicians of Edinburgh, Royal College of Surgeons of England, University College London, University of Leeds, University of Glasgow, London School of Hygiene and Tropical Medicine, King’s College London and the University of Bristol. As a collective, this will make a valuable resource for the exploration of medical humanities.

The aim has been to create a comprehensive online resource for the history of medicine and related sciences, which significantly increases the availability of digitised text for teaching, learning and research.

The collection, called the UK Medical Heritage Library, is completely open and can now be accessed for free via Jisc’s Historical Texts resource or via the Wellcome Library’s website.

Brought to you by Scope e-Knowledge Center, a world-leading provider of Abstracting & Indexing (A&I) Services, Knowledge Modeling Services (Taxonomies, Thesauri and Ontologies), Metadata Enrichment & Entity Extraction Services.”

Click here

Source:  Knowledgespeak Newsletter

Scopus has added 5 million pre-1996 articles and over 93 million references

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“Scopus has added 5 million pre-1996 articles and over 93 million references – and we’re not even half-way

Submitted by Pierre van Doorn
on Thu, 11/26/2015 – 16:06

As of this week, Scopus has added 5 million pre-1996 records including over 93 million references to the database. This has been done in two ways: by adding pre-1996 cited references to existing articles in Scopus and by adding article back files, including their cited references, coming from archives from various publishers, going back to 1970.

This milestone is the result of the ongoing Scopus Cited Reference Expansion Program initiated in March 2014 that aims to include cited references in Scopus going back to 1970 for pre-1996 content. The goal of this expansion program is to further enhance the ability for Scopus users to perform long-term, extensive bibliometric and historic trend analyses – and to enhance and further complete the h-index for researchers who published pre-1996.

Archives already completed include the following publishers: Lippincott Williams & Wilkins, American Society of Civil Engineers (ASCE). American Physical Society (APS), Karger Publishers, Royal Society of Chemistry (RSC), Springer, American Medical Association (AMA), Inderscience and Elsevier.

Additional archives currently in process include: Wiley Blackwell, BioMedCentral (BMC), Taylor & Francis, Oxford University Press, Society of Automotive Engineers International, (SAE), Walter de Gruyter, Institute of Electrical and Electronics Engineers (IEEE), Institute of Physics (IoP), Brill Publishers, Sage, Emerald Group Publishing, Association for Computing Machinery (ACM) and the American Geophysical Union (AGU).

We will keep you updated on the progress of this Expansion Program, and make sure to follow this blog or our Twitter account to stay up to date.”

Release Date:
November 26 2015
Source:  http://blog.scopus.com/posts

MEDLINE ANNUAL CHANGES/UPDATES

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National Library of Medicine Technical Bulletin

This article collects the notable data changes made to MEDLINE during annual National Library of Medicine (NLM) maintenance known as Year-End Processing (YEP) for 2016:

MEDLINE Data Changes — 2016

Tybaert S. NLM Tech Bull. 2015 Nov-Dec;(407):e8.

2015 December 08 [posted]

Brand new concepts include: Autism Spectrum Disorder, Human Embryonic Stem Cells, Olive Oil, Origin of Life, Open Access Publishing, War-Related Injuries, RNAi Therapeutics, and many more terms.  Medline thesaurus terms are remapped when changes occur, so as to include articles under former headings.

Elsevier’s ScienceDirect dropping access via Internet Explorer 8

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Effective January 1, 2016, ScienceDirect will no longer support Internet Explorer 8 (IE8).

“We strongly encourage our customers to follow Microsoft’s directive as well by updating to more recent versions of IE. Additionally, users can move to the latest versions of the Chrome or Firefox browsers for an optimal ScienceDirect experience”

The whys:

  • Remove current IE8 security issues
  • Enhance existing security measures across all browsers
  • Add support for new browser technologies
  • Add responsive design to aid use of ScienceDirect across devices
  • Improve accessibility to better enable access to people with diverse abilities

 

  • If you have any questions or concerns, please visit the ScienceDirect Blog Source:  Email today from Elsevier ScienceDirect <sciencedirect@mail.elsevier.com>

ProQuest full text of scholarly journal content soon indexed by Google Scholar

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By Kurt Sanford, CEO

“ProQuest is enabling the full text of its scholarly journal content to be indexed in Google Scholar, improving discovery and research outcomes. Our goal is that by the third quarter of 2015, users starting their research in Google Scholar will be able to access full text via ProQuest.”

http://www.proquest.com/blog/pqblog/2015/Why-ProQuest-is-working-with-Google.html

Feed

Tuesday, 18th August 2015

ProQuest Scholarly Content Now Discoverable in Google Scholar

By Africa S. Hands

From No Shelf Required:

ProQuest has marked another milestone in ease of access to its rich research content. The full text of its scholarly content – including journals and working papers – is now indexed in Google Scholar, enabling Google Scholar users to seamlessly discover and access their library’s ProQuest collections. Efficiency and productivity for both ProQuest and Google Scholar users is improved, while libraries benefit from increased usage for their subscribed collections.

Full story >>

http://www.libraries.wright.edu/noshelfrequired/2015/08/12/proquest-scholarly-content-now-discoverable-in-google-scholar/

Source via: ResourceShelf Newsletter – 8th September 2015

[ResourceShelf] Newsletter 643

NSF Special Report: Understanding the Brain

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  • http://www.nsf.gov/news/special_reports/brain/“In 2013, President Obama unveiled “The Brain Initiative,” a ten-year, nearly one billion dollar effort to unlock the mysteries of the brain. With contributions by everyone from the National Institutes of Health (NIH) to the National Science Foundation (NSF) to Google, the initiative focuses on diverse fields and research methodologies. Readers will find much to explore on this accompanying website from NSF, including several dozen beautifully produced videos designed for classroom use. The videos, most of which are about five-minutes in length, cover topics such as the thinking brain, the perceiving brain, brain states and consciousness, the evolving brain, the emotional brain, the effects of musical training on the brain, and interviews with a number of groundbreaking brain researchers. Additionally, readers may peruse information about the brain initiative on the site, including Funding, Events, Resources, and News related to the project.”[CNH]
  • Source:  Scout Report, Univ. of Wisc., 7/17/2015, Vol. 21 (27)